University of South Carolina  FUTURE STUDENTS PRESENT STUDENTS SEMINARS DEPARTMENTS

For more information please contact
 Dr Bob Price

ADVANCED BIOTECHNOLOGY METHODS

FALL AND SPRING SEMESTERS

 

 

Application

 

Faculty

 
Minimum of 2 hours lecture and 6 hours of lab time each week is required. A maximum of 10 students, including those taking the class as PhD students are admitted each semester
 
IMAGING GENOMICS AND PROTEOMICS
Fall Semester Spring Semester 


Light Microscopy (4 weeks)

  • Theory and Instrumentation
  • Specimen Processing for Paraffin and Cryo-sectioning
  • Routine stains – Hematoxylin and Eosin
  • Special stains – PAS, Trichromes etc
  • Immunohistochemistry including antigen retrieval methods
  • In situ hybridization – slides and whole mounts

Digital Imaging (2 weeks)

  • Description of digital images
  • Image enhancement
  • Image processing
  • Ethics in digital imaging

Confocal Microscopy (3 weeks)

  • Theory and Instrumentation
  • Specimen Processing
  • 2D Image Collection and Analysis
  • 3D Image Collection and Reconstruction
  • Advanced techniques – i.e. FRET, FRAP

Live Cell Imaging (2 weeks)

  • Cell Culture Techniques
  • Theory and Instrumentation
  • Short term imaging – i.e. pH and calcium flux imaging
  • Long term imaging – i.e. cell division and migration assays

Scanning and Transmission Electron Microscopy (4 weeks)

  • Theory and Instrumentation
  • Specimen Processing
  • Operation of Scanning EM
  • Operation of Transmission EM

Small Animal Ultrasound Imaging (1 week)

  • Theory and Instrumentation
  • Cardiovascular Imaging
  • Abdominal and Cancer Imaging
     


Laser Capture Micro-dissection and Agilent 2100 Bioanalyzer (2 weeks)

  • Theory and Instrumentation
  • Specimen prep and quality control for DNA, RNA and Protein Applications

DNA Microarrays (3 weeks)

  • Theory and Instrumentation
  • Specimen Preparation
  • Spotting and Data Collection
  • Data Analysis

Real Time PCR (2 weeks)

  • Theory and Instrumentation
  • Specimen Preparation
  • Data collection and analysis

Mass Spectrometry (2 weeks)

  • Theory and Instrumentation
  • Specimen Preparation
  • Data collection and analysis

Western and Northern blotting (3 weeks)

  • Theory and Instrumentation (BioRad FX, Kodak IM 2000 systems)
  • Specimen Preparation
  • Data collection and analysis

Flow Based Techniques (4 weeks)

  • Theory and Instrumentation (Bioplex, FACS, Sterile Cell Sorting)
  • Specimen Preparation
  • Data collection and analysis
  

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